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Research Papers

  1. Disruption of promoter memory by a long noncoding RNA
    Yu Y, Yarrington RM, Chuong EB, Elde NC, Stillman DJ
    PNAS (2016)
  2. Regulatory evolution of innate immunity through co-option of endogenous retroviruses
    Chuong EB, Elde NC*, Feschotte C*
    Science (2016)
  3. Copy number variation is a fundamental aspect of the placental genome
    Hannibal RL, Chuong EB, Mulia JR, Gilbert DM, Valouev A, Baker JC
    PLOS Genetics (2014)
  4. Chromatin immunoprecipitation and deep sequencing in Xenopus tropicalis and Xenopus laevis
    Wills AE, Gupta R, Chuong EB, Baker JC
    Methods (2014)
  5. Endogenous retroviruses function as species-specific enhancer elements in the placenta
    Chuong EB, Rumi MA, Soares MJ, Baker JC
    Nature Genetics (2013)
  6. HEB and E2A function as SMAD/FOXH1 cofactors
    Yoon SJ, Wills AE, Chuong EB, Gupta R, Baker JC
    Genes and Development (2011)
  7. Chromatin and transcriptional signatures for Nodal signaling during endoderm formation in hESCs
    Kim SW*, Yoon SJ*, Chuong EB*, Oyolu CB, Wills AE, Gupta R, Baker JC
    Developmental Biology (2011) 
  8. Maternal-fetal conflict: Rapidly evolving proteins in the rodent placenta
    Chuong EB, Tong W, Hoekstra HE
    Molecular Biology and Evolution (2010)
  9. Comparative analysis of testis protein evolution in rodents
    Turner LM, Chuong EB, Hoekstra HE
    Genetics (2008)
    *equal contribution

Reviews and Commentaries

  1. Regulatory activities of transposable elements: from conflicts to benefits
    Chuong EB, Elde NC, Feschotte C.
    Nature Reviews Genetics (2016)
  2. Perspective: Transposons up the dosage
    Chuong EB, Feschotte C.
    Science (2013)
  3. Evolutionary perspectives into placental biology and disease
    Chuong EB, Hannibal RL, Green SL, Baker JC
    Applied & Translational Genomics (2013)
  4.  Retroviruses facilitate the rapid evolution of the mammalian placenta
    Chuong EB
    Bioessays (2013) highlighted article